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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934924.1_cds_XP_016480908.1_72299
CDS Infomation

[gene=LOC107801990] [db_xref=GeneID:107801990] [protein=aspartyl protease AED3-like] [protein_id=XP_016480908.1] [location=complement(join(3799..4844,5421..5706))] [gbkey=CDS]
Sequence

ATGGCCTTATCCATAGCCACTTTCCTCTTAATCACTCTTCTTTCTACGACATCTTCAGCT
TCTGATTCTTGTGCTTCTTCCAAAGGTAATTCAGACCTTTCAATCATTCACATTTATGGG
AAATGCTCACCCTTTAACCCACCTAAACCTTCCTCTTCATTTCTCAATACTGTTATCAAC
ATGGCCTCAAAAGACCCACAAAGGCTCTCTTATTTATCCAGCTTAGTAGTATCCAAAAAG
CCAACTATTGTGCCCATTGCTCCAGCCCAGAACCTCTTCAATATAGGTAACTATGTGGTC
AAGGCAAAGATTGGTACTCCAGGCCAGCTTATGTACATGGTCTTGGATACTAGTAACGAT
AATGCATGGGTACCATGTAGTGGTTGTGTTGGGTGCACATCTAATACTTTGTTTGCCCCA
ACTACGTCCTCTACTTACGGGTCAGTAGACTGCTCCGTACCCGAATGTACTCAAGTCCGC
GGGCTCTCTTGCACGAGTACTGGGTCGGGATCCGGGTCAAGTGCTTGCTTCTTCAACCAA
TCATATGGCGGAGATTCATCGTTCTATGCCACGCTGTCACGTGACTCACTTGGACTAGCC
AATGATGTTGTTCCAAATTATGCTTTCGGGTGCATTAGTGCTGTATCTGGAAACGCAATA
CCGCCCCAAGGGTTGTTGGGTTTGGGTAGGGGCTCCATGTCGTTAATGTCACAGTCCGGA
TCACTTTATTCGGGCGTATTCTCATATTGTTTACCAAGTTTTAAATCGTATTATTTCTCC
GGATCACTCAAACTTGGACCCCTGGGTCAACCCAAGAATATCAAAACTACCCCATTACTC
AAGAACCCGCGCCGACCATCATTGTACTACGTGAACTTGACAAGTGTAAGTGTGGGACGA
GTCCAGGTTCCCATTGCCCCCGAGCAACTTGGTTTTGACTCGAACACCGGTGCAGGAACC
ATAATCGACTCGGGGACGGTCATAACCCGATTCGTCCCACCGGCTTACAATGCAATCCGG
GATGAATTTAGGAAACAAGTGAAAGGGCCCTTTAGCTCGTTGGGTGCATTTGACACATGT
TTTGCATCACCAAATGAAGCAGGGGCACCAGCCATCACATTGCACTTTGAGGGAATGGAT
TTAAAGCTGCCAATGGAGAACACTTTGATACACAGCAGTGCTACCCCCTTGGCATGTTTG
GCAATGGCAGCAGCCCCAAACAATGTGAACTCAGTGTTGAATGTGATAGCCAATTTGCAG
CAGCAGAACCTCAGGATTTTGTTTGACACTGCAAATTCTCGCGTGGGAATTGCTCGTGAA
GTTTGTAACTAG

Peptide Sequence

PEP ID

XP_016480908.1
PEP Infomation

PREDICTED: aspartyl protease AED3-like [Nicotiana tabacum]
Sequence

MALSIATFLLITLLSTTSSASDSCASSKGNSDLSIIHIYGKCSPFNPPKPSSSFLNTVIN
MASKDPQRLSYLSSLVVSKKPTIVPIAPAQNLFNIGNYVVKAKIGTPGQLMYMVLDTSND
NAWVPCSGCVGCTSNTLFAPTTSSTYGSVDCSVPECTQVRGLSCTSTGSGSGSSACFFNQ
SYGGDSSFYATLSRDSLGLANDVVPNYAFGCISAVSGNAIPPQGLLGLGRGSMSLMSQSG
SLYSGVFSYCLPSFKSYYFSGSLKLGPLGQPKNIKTTPLLKNPRRPSLYYVNLTSVSVGR
VQVPIAPEQLGFDSNTGAGTIIDSGTVITRFVPPAYNAIRDEFRKQVKGPFSSLGAFDTC
FASPNEAGAPAITLHFEGMDLKLPMENTLIHSSATPLACLAMAAAPNNVNSVLNVIANLQ
QQNLRILFDTANSRVGIAREVCN

Transcript Sequence

Gene sequence data has not been registered.